- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | canFam2-1 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | + | 50-71 | 41482954-41483047 | 0.869864 | Paralog | 3/44 | 54/2260 |
2 | canFam2-2 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | + | 50-72 | 44324796-44324883 | 0.925737 | Paralog | 3/44 | 54/2260 |
3 | canFam2-7 | let-7 | bfl-let-7-1-as | 21/22 | chr1 | + | 51-72 | 108280852-108280930 | 0.902248 | Paralog | 44/65 | 10/337 |
4 | canFam2-14 | let-7 | aga-let-7 | 20/21 | chr1 | - | 2-22 | 100973220-100973291 | 0.989021 | Paralog | 44/65 | 10/337 |
5 | canFam2-14 | let-7 | spu-let-7 | 21/22 | chr1 | - | 3-24 | 100973219-100973292 | 0.989633 | Paralog | 44/65 | 10/337 |
6 | canFam2-17 | mir-371 | hsa-miR-371-5p | 20/20 | chr1 | - | 14-33 | 106488120-106488203 | 0.99872 | Paralog | 4/15 | 2/26 |
7 | canFam2-13 | mir-876 | cfa-miR-876 | 20/22 | chr1 | - | 45-65 | 96209185-96209260 | 0.868642 | Paralog | 6/17 | 2/21 |
8 | canFam2-17 | mir-371 | mml-miR-371-3p | 22/23 | chr1 | - | 49-71 | 106488122-106488201 | 0.999964 | Paralog | 4/15 | 2/26 |
9 | canFam2-33 | mir-574 | hsa-miR-574-5p | 21/23 | chr10 | - | 48-70 | 70577474-70577548 | 0.926832 | Paralog | 3/44 | 54/2260 |
10 | canFam2-32 | mir-574 | hsa-miR-574-5p | 21/23 | chr10 | - | 49-71 | 50314216-50314305 | 0.987159 | Paralog | 3/44 | 54/2260 |
11 | canFam2-36 | mir-574 | hsa-miR-574-5p | 21/23 | chr11 | + | 35-56 | 77141701-77141804 | 0.930913 | Paralog | 3/44 | 54/2260 |
12 | canFam2-45 | mir-574 | hsa-miR-574-5p | 21/23 | chr12 | - | 46-68 | 58349930-58350010 | 0.964727 | Paralog | 3/44 | 54/2260 |
13 | canFam2-57 | mir-335 | mmu-miR-335-3p | 20/22 | chr14 | + | 47-68 | 9397203-9397278 | 0.99892 | Paralog | 7/16 | 2/22 |
14 | canFam2-59 | mir-574 | hsa-miR-574-5p | 21/23 | chr14 | + | 50-72 | 60542671-60542780 | 0.847536 | Paralog | 3/44 | 54/2260 |
15 | canFam2-72 | mir-574 | hsa-miR-574-5p | 21/23 | chr16 | - | 23-44 | 15499757-15499850 | 0.828443 | Paralog | 3/44 | 54/2260 |
16 | canFam2-76 | mir-574 | hsa-miR-574-5p | 21/23 | chr16 | - | 32-54 | 54192867-54192966 | 0.850432 | Paralog | 3/44 | 54/2260 |
17 | canFam2-82 | mir-493 | hsa-miR-493 | 20/22 | chr17 | + | 5-26 | 45918293-45918366 | 0.99887 | Paralog | 6/12 | 4/18 |
18 | canFam2-87 | mir-1837 | cfa-miR-1837 | 22/22 | chr17 | - | 17-38 | 24488077-24488164 | 0.938962 | Paralog | 1/2 | 5/6 |
19 | canFam2-88 | mir-1837 | cfa-miR-1837 | 22/22 | chr17 | - | 17-38 | 24595921-24596006 | 0.985131 | Paralog | 1/2 | 5/6 |
20 | canFam2-89 | mir-1837 | cfa-miR-1837 | 22/22 | chr17 | - | 17-38 | 24724754-24724839 | 0.987665 | Paralog | 1/2 | 5/6 |
21 | canFam2-90 | mir-574 | hsa-miR-574-5p | 21/23 | chr17 | - | 49-71 | 45776360-45776430 | 0.995173 | Paralog | 3/44 | 54/2260 |
22 | canFam2-86 | mir-378 | hsa-miR-378* | 20/22 | chr17 | - | 50-70 | 11416805-11416893 | 0.964785 | Paralog | 7/10 | 2/14 |
23 | canFam2-95 | mir-194 | dre-miR-194a | 21/21 | chr18 | + | 14-34 | 55305582-55305663 | 0.999942 | Paralog | 17/29 | 2/47 |
24 | canFam2-95 | mir-194 | cfa-miR-194 | 22/22 | chr18 | + | 14-35 | 55305582-55305663 | 0.999953 | Paralog | 17/29 | 2/47 |
25 | canFam2-97 | mir-574 | hsa-miR-574-5p | 21/23 | chr18 | + | 25-47 | 55478455-55478549 | 0.988241 | Paralog | 3/44 | 54/2260 |
26 | canFam2-93 | mir-574 | hsa-miR-574-5p | 22/23 | chr18 | + | 48-70 | 29201074-29201156 | 0.972718 | Paralog | 3/44 | 54/2260 |
27 | canFam2-95 | mir-194 | hsa-miR-194* | 20/22 | chr18 | + | 52-71 | 55305580-55305665 | 0.998712 | Paralog | 17/29 | 2/47 |
28 | canFam2-101 | mir-345 | bta-miR-345 | 19/21 | chr18 | - | 50-69 | 46859846-46859921 | 0.955959 | Paralog | 7/14 | 2/17 |
29 | canFam2-107 | mir-493 | hsa-miR-493* | 20/22 | chr19 | - | 48-69 | 6718772-6718863 | 0.856167 | Paralog | 6/12 | 4/18 |
30 | canFam2-115 | mir-574 | hsa-miR-574-5p | 21/23 | chr2 | - | 6-28 | 27326829-27326905 | 0.97361 | Paralog | 3/44 | 54/2260 |
31 | canFam2-118 | mir-574 | hsa-miR-574-5p | 21/23 | chr20 | + | 28-48 | 45065391-45065487 | 0.979435 | Paralog | 3/44 | 54/2260 |
32 | canFam2-122 | mir-574 | hsa-miR-574-5p | 22/23 | chr20 | - | 35-57 | 52082628-52082731 | 0.904351 | Paralog | 3/44 | 54/2260 |
33 | canFam2-125 | mir-149 | hsa-miR-149* | 19/21 | chr21 | + | 33-52 | 28643330-28643430 | 0.800694 | Paralog | 5/9 | 2/10 |
34 | canFam2-129 | mir-574 | hsa-miR-574-5p | 21/23 | chr21 | - | 43-65 | 22114788-22114871 | 0.950793 | Paralog | 3/44 | 54/2260 |
35 | canFam2-127 | mir-574 | hsa-miR-574-5p | 21/23 | chr21 | - | 48-70 | 17659791-17659871 | 0.990727 | Paralog | 3/44 | 54/2260 |
36 | canFam2-131 | mir-186 | cfa-miR-186 | 21/22 | chr22 | + | 7-28 | 57518178-57518253 | 0.923852 | Paralog | 12/24 | 2/29 |
37 | canFam2-132 | mir-574 | hsa-miR-574-5p | 21/23 | chr22 | - | 49-71 | 17095473-17095579 | 0.920723 | Paralog | 3/44 | 54/2260 |
38 | canFam2-137 | mir-574 | hsa-miR-574-5p | 21/23 | chr23 | - | 49-71 | 9050027-9050107 | 0.961429 | Paralog | 3/44 | 54/2260 |
39 | canFam2-141 | mir-103 | hsa-miR-103-as | 23/23 | chr24 | + | 13-35 | 20465766-20465848 | 0.914481 | Paralog | 21/38 | 4/118 |
40 | canFam2-148 | mir-1 | mmu-miR-1-2-as | 21/21 | chr24 | - | 11-31 | 49527533-49527613 | 0.953994 | Paralog | 41/61 | 4/166 |
41 | canFam2-143 | mir-574 | hsa-miR-574-5p | 21/23 | chr24 | - | 19-41 | 20611386-20611474 | 0.976494 | Paralog | 3/44 | 54/2260 |
42 | canFam2-144 | mir-574 | hsa-miR-574-5p | 21/23 | chr24 | - | 43-65 | 34550566-34550650 | 0.993161 | Paralog | 3/44 | 54/2260 |
43 | canFam2-146 | mir-574 | hsa-miR-574-5p | 22/23 | chr24 | - | 49-71 | 45921605-45921702 | 0.836277 | Paralog | 3/44 | 54/2260 |
44 | canFam2-145 | mir-34 | cin-miR-34 | 20/22 | chr24 | - | 49-70 | 44879321-44879418 | 0.875885 | Paralog | 45/67 | 4/144 |
45 | canFam2-152 | mir-574 | hsa-miR-574-5p | 21/23 | chr25 | - | 42-63 | 42571822-42571923 | 0.856427 | Paralog | 3/44 | 54/2260 |
46 | canFam2-153 | mir-574 | hsa-miR-574-5p | 21/23 | chr25 | - | 48-70 | 47840367-47840475 | 0.824412 | Paralog | 3/44 | 54/2260 |
47 | canFam2-156 | mir-574 | hsa-miR-574-5p | 21/23 | chr26 | + | 16-37 | 38711240-38711318 | 0.999557 | Paralog | 3/44 | 54/2260 |
48 | canFam2-160 | mir-302 | cfa-miR-302a | 21/23 | chr27 | - | 29-51 | 10025475-10025573 | 0.964967 | Paralog | 10/25 | 5/92 |
49 | canFam2-163 | mir-574 | hsa-miR-574-5p | 21/23 | chr28 | - | 44-65 | 32128302-32128409 | 0.880404 | Paralog | 3/44 | 54/2260 |
50 | canFam2-166 | mir-574 | hsa-miR-574-5p | 21/23 | chr29 | - | 31-53 | 16203835-16203931 | 0.932053 | Paralog | 3/44 | 54/2260 |
51 | canFam2-175 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | + | 20-42 | 68974178-68974266 | 0.987926 | Paralog | 3/44 | 54/2260 |
52 | canFam2-173 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | + | 40-62 | 40082273-40082350 | 0.881776 | Paralog | 3/44 | 54/2260 |
53 | canFam2-169 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | + | 49-71 | 10683240-10683316 | 0.998687 | Paralog | 3/44 | 54/2260 |
54 | canFam2-180 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | - | 25-47 | 55921804-55921899 | 0.958095 | Paralog | 3/44 | 54/2260 |
55 | canFam2-178 | mir-574 | hsa-miR-574-5p | 21/23 | chr3 | - | 41-63 | 40809329-40809396 | 0.989452 | Paralog | 3/44 | 54/2260 |
56 | canFam2-188 | mir-574 | hsa-miR-574-5p | 21/23 | chr31 | + | 20-42 | 32853808-32853890 | 0.965311 | Paralog | 3/44 | 54/2260 |
57 | canFam2-189 | mir-125 | bfl-miR-125b-as | 22/22 | chr31 | - | 48-69 | 16314516-16314594 | 0.999471 | Paralog | 45/62 | 5/195 |
58 | canFam2-197 | mir-574 | hsa-miR-574-5p | 21/23 | chr33 | + | 50-72 | 14535223-14535313 | 0.997302 | Paralog | 3/44 | 54/2260 |
59 | canFam2-199 | mir-574 | hsa-miR-574-5p | 21/23 | chr34 | + | 26-48 | 3368836-3368930 | 0.995387 | Paralog | 3/44 | 54/2260 |
60 | canFam2-207 | mir-574 | hsa-miR-574-5p | 21/23 | chr35 | - | 17-39 | 6843283-6843370 | 0.908908 | Paralog | 3/44 | 54/2260 |
61 | canFam2-208 | mir-150 | xtr-miR-150 | 20/22 | chr35 | - | 22-43 | 15885613-15885705 | 0.854397 | Paralog | 10/18 | 2/19 |
62 | canFam2-209 | mir-574 | hsa-miR-574-5p | 21/23 | chr35 | - | 46-68 | 24373470-24373558 | 0.897089 | Paralog | 3/44 | 54/2260 |
63 | canFam2-210 | mir-574 | hsa-miR-574-5p | 21/23 | chr36 | + | 1-23 | 4944574-4944644 | 0.916152 | Paralog | 3/44 | 54/2260 |
64 | canFam2-212 | mir-491 | hsa-miR-491-5p | 20/22 | chr36 | - | 49-70 | 6491208-6491293 | 0.953626 | Paralog | 6/16 | 2/17 |
65 | canFam2-224 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | + | 14-36 | 35964438-35964521 | 0.999398 | Paralog | 3/44 | 54/2260 |
66 | canFam2-227 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | + | 34-56 | 85656815-85656918 | 0.825015 | Paralog | 3/44 | 54/2260 |
67 | canFam2-225 | mir-365 | hsa-miR-365* | 20/22 | chr4 | + | 47-68 | 43080587-43080657 | 0.97806 | Paralog | 16/32 | 3/57 |
68 | canFam2-228 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | + | 48-70 | 89051351-89051443 | 0.960632 | Paralog | 3/44 | 54/2260 |
69 | canFam2-233 | mir-103 | hsa-miR-103-as | 23/23 | chr4 | - | 11-33 | 46381009-46381090 | 0.866021 | Paralog | 21/38 | 4/118 |
70 | canFam2-236 | mir-574 | hsa-miR-574-5p | 21/23 | chr4 | - | 28-50 | 78724737-78724835 | 0.996568 | Paralog | 3/44 | 54/2260 |
71 | canFam2-232 | mir-872 | mmu-miR-872* | 20/22 | chr4 | - | 49-70 | 30700064-30700160 | 0.989656 | Paralog | 3/5 | 2/6 |
72 | canFam2-240 | mir-140 | mne-miR-140 | 19/21 | chr5 | + | 16-35 | 82820501-82820584 | 0.998453 | Paralog | 15/31 | 2/51 |
73 | canFam2-241 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | + | 26-47 | 84042325-84042418 | 0.893544 | Paralog | 3/44 | 54/2260 |
74 | canFam2-242 | mir-574 | hsa-miR-574-5p | 21/23 | chr5 | + | 49-71 | 91430006-91430089 | 0.802687 | Paralog | 3/44 | 54/2260 |
75 | canFam2-243 | mir-483 | cfa-miR-483 | 19/21 | chr5 | - | 49-68 | 12113959-12114026 | 0.939626 | Paralog | 5/9 | 2/10 |
76 | canFam2-245 | mir-574 | hsa-miR-574-5p | 23/23 | chr5 | - | 49-71 | 20628799-20628878 | 0.952588 | Paralog | 3/44 | 54/2260 |
77 | canFam2-244 | mir-125 | bfl-miR-125b-as | 22/22 | chr5 | - | 49-70 | 15102659-15102740 | 0.98572 | Paralog | 45/62 | 5/195 |
78 | canFam2-259 | mir-574 | hsa-miR-574-5p | 21/23 | chr6 | - | 26-48 | 22514232-22514327 | 0.996646 | Paralog | 3/44 | 54/2260 |
79 | canFam2-258 | mir-514 | hsa-miR-514 | 19/21 | chr6 | - | 46-65 | 20408497-20408580 | 0.823926 | Paralog | 7/17 | 2/30 |
80 | canFam2-261 | mir-574 | hsa-miR-574-5p | 21/23 | chr6 | - | 50-72 | 74849693-74849768 | 0.806076 | Paralog | 3/44 | 54/2260 |
81 | canFam2-267 | mir-320 | xtr-miR-320 | 19/21 | chr7 | + | 24-43 | 74456160-74456251 | 0.868415 | Paralog | 8/16 | 2/38 |
82 | canFam2-265 | mir-329 | cfa-miR-329a | 21/23 | chr7 | + | 49-71 | 61079247-61079338 | 0.982093 | Paralog | 7/20 | 3/33 |
83 | canFam2-270 | mir-1 | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 69255523-69255603 | 0.952326 | Paralog | 41/61 | 4/166 |
84 | canFam2-282 | mir-574 | hsa-miR-574-5p | 21/23 | chr8 | + | 50-72 | 72474878-72474979 | 0.854394 | Paralog | 3/44 | 54/2260 |
85 | canFam2-286 | mir-574 | hsa-miR-574-5p | 21/23 | chr8 | - | 9-31 | 37328804-37328881 | 0.938853 | Paralog | 3/44 | 54/2260 |
86 | canFam2-287 | mir-299 | cfa-miR-299 | 21/22 | chr8 | - | 22-42 | 72298265-72298356 | 0.999244 | Paralog | 6/18 | 2/37 |
87 | canFam2-294 | mir-31 | gga-miR-31 | 20/22 | chr9 | + | 13-34 | 59481445-59481526 | 0.988626 | Paralog | 40/60 | 2/107 |
88 | canFam2-290 | mir-95 | cfa-miR-95 | 20/22 | chr9 | + | 24-45 | 10486124-10486216 | 0.842668 | Paralog | 11/13 | 3/17 |
89 | canFam2-298 | mir-493 | mmu-miR-493 | 21/23 | chr9 | - | 19-41 | 42927750-42927840 | 0.896933 | Paralog | 6/12 | 4/18 |
90 | canFam2-295 | mir-95 | cfa-miR-95 | 20/22 | chr9 | - | 27-48 | 11658931-11659028 | 0.86852 | Paralog | 11/13 | 3/17 |
91 | canFam2-297 | mir-574 | hsa-miR-574-5p | 21/23 | chr9 | - | 27-48 | 40704361-40704455 | 0.997826 | Paralog | 3/44 | 54/2260 |
92 | canFam2-302 | mir-1837 | cfa-miR-1837 | 22/22 | chrUn | + | 17-38 | 61302051-61302136 | 0.987665 | Paralog | 1/2 | 5/6 |
93 | canFam2-307 | mir-500 | hsa-miR-500 | 23/23 | chrX | + | 12-34 | 42735331-42735412 | 0.999919 | Paralog | 7/16 | 2/24 |
94 | canFam2-314 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | + | 38-59 | 122044780-122044885 | 0.867291 | Paralog | 3/44 | 54/2260 |
95 | canFam2-307 | mir-502 | cfa-miR-502 | 20/22 | chrX | + | 51-71 | 42735330-42735413 | 0.999446 | Paralog | 5/15 | 2/19 |
96 | canFam2-307 | mir-500 | cfa-miR-500 | 19/21 | chrX | + | 52-71 | 42735330-42735413 | 0.999455 | Paralog | 7/16 | 2/24 |
97 | canFam2-319 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | - | 4-26 | 90394325-90394395 | 0.999673 | Paralog | 3/44 | 54/2260 |
98 | canFam2-315 | mir-574 | hsa-miR-574-5p | 21/23 | chrX | - | 8-30 | 6898042-6898107 | 0.996897 | Paralog | 3/44 | 54/2260 |
Total | 98 record(s). |